Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Syne3Q4FZC9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne3Q4FZC9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Syne3Q4FZC9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne3Q4FZC9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Syne3Q4FZC9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne3Q4FZC9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Gm13168-201ENSMUST00000121771 632 ntBASIC18.55■□□□□ 0.56
Syne3Q4FZC9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Mtag2-201ENSMUST00000058665 714 ntBASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne3Q4FZC9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Gm10138-203ENSMUST00000206952 366 ntBASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syne3Q4FZC9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syne3Q4FZC9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syne3Q4FZC9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syne3Q4FZC9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syne3Q4FZC9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Syne3Q4FZC9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Syne3Q4FZC9 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.52■□□□□ 0.56
Syne3Q4FZC9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.52■□□□□ 0.56
Syne3Q4FZC9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syne3Q4FZC9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syne3Q4FZC9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syne3Q4FZC9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Syne3Q4FZC9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
Syne3Q4FZC9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Syne3Q4FZC9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syne3Q4FZC9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne3Q4FZC9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne3Q4FZC9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne3Q4FZC9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne3Q4FZC9 Gm5643-201ENSMUST00000117081 966 ntBASIC18.5■□□□□ 0.55
Syne3Q4FZC9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Syne3Q4FZC9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne3Q4FZC9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms