Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zfp560Q3URI6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Zfp560Q3URI6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zfp560Q3URI6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Zfp560Q3URI6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Zfp560Q3URI6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.52■□□□□ 0.4
Zfp560Q3URI6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Zfp560Q3URI6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Zfp560Q3URI6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Zfp560Q3URI6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Zfp560Q3URI6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Zfp560Q3URI6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.52■□□□□ 0.39
Zfp560Q3URI6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Zfp560Q3URI6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zfp560Q3URI6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Mir1199-201ENSMUST00000117015 119 ntBASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zfp560Q3URI6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Gm10517-202ENSMUST00000192970 758 ntBASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zfp560Q3URI6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Mir8112-201ENSMUST00000184382 131 ntBASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Gm4974-201ENSMUST00000209974 875 ntBASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zfp560Q3URI6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms