Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrk1Q3UHC2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Gm11539-201ENSMUST00000119837 557 ntBASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Gm13436-201ENSMUST00000120418 567 ntBASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Gm7889-201ENSMUST00000185591 958 ntBASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Gm9731-201ENSMUST00000209480 747 ntBASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Gm30025-201ENSMUST00000218555 728 ntBASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.18■□□□□ 0.18
Lrrk1Q3UHC2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Lrrk1Q3UHC2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrk1Q3UHC2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Lrrk1Q3UHC2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrk1Q3UHC2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Lrrk1Q3UHC2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrk1Q3UHC2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.17■□□□□ 0.18
Lrrk1Q3UHC2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.17■□□□□ 0.18
Lrrk1Q3UHC2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.17■□□□□ 0.18
Lrrk1Q3UHC2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrk1Q3UHC2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Gm24841-201ENSMUST00000158676 357 ntBASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Gm17661-201ENSMUST00000170317 270 ntBASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.16■□□□□ 0.18
Lrrk1Q3UHC2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrk1Q3UHC2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms