Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col5a2Q3U962 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.75■□□□□ 0.91
Col5a2Q3U962 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.75■□□□□ 0.91
Col5a2Q3U962 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.75■□□□□ 0.91
Col5a2Q3U962 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col5a2Q3U962 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Col5a2Q3U962 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col5a2Q3U962 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col5a2Q3U962 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col5a2Q3U962 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col5a2Q3U962 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col5a2Q3U962 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col5a2Q3U962 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col5a2Q3U962 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col5a2Q3U962 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.72■□□□□ 0.91
Col5a2Q3U962 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a2Q3U962 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Gm18206-201ENSMUST00000207027 926 ntBASIC20.71■□□□□ 0.91
Col5a2Q3U962 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col5a2Q3U962 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.71■□□□□ 0.91
Col5a2Q3U962 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.7■□□□□ 0.91
Col5a2Q3U962 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col5a2Q3U962 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col5a2Q3U962 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col5a2Q3U962 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.7■□□□□ 0.9
Col5a2Q3U962 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col5a2Q3U962 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col5a2Q3U962 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col5a2Q3U962 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col5a2Q3U962 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col5a2Q3U962 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Gm18195-201ENSMUST00000207604 706 ntBASIC20.69■□□□□ 0.9
Col5a2Q3U962 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.69■□□□□ 0.9
Col5a2Q3U962 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.69■□□□□ 0.9
Col5a2Q3U962 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col5a2Q3U962 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms