Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shcbp1lQ3TTP0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shcbp1lQ3TTP0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Gm6433-201ENSMUST00000118634 875 ntBASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Gm43799-201ENSMUST00000201845 579 ntBASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shcbp1lQ3TTP0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shcbp1lQ3TTP0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Gm4974-201ENSMUST00000209974 875 ntBASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shcbp1lQ3TTP0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Shcbp1lQ3TTP0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shcbp1lQ3TTP0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Gm29791-202ENSMUST00000207888 369 ntBASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shcbp1lQ3TTP0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.57■□□□□ 0.4
Shcbp1lQ3TTP0 Gm9987-201ENSMUST00000069768 567 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms