Protein–RNA interactions for Protein: Q04207

Rela, Transcription factor p65, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RelaQ04207 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RelaQ04207 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RelaQ04207 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RelaQ04207 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RelaQ04207 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RelaQ04207 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RelaQ04207 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RelaQ04207 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RelaQ04207 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RelaQ04207 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RelaQ04207 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.18■□□□□ 0.5
RelaQ04207 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.18■□□□□ 0.5
RelaQ04207 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.18■□□□□ 0.5
RelaQ04207 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RelaQ04207 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.17■□□□□ 0.5
RelaQ04207 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.17■□□□□ 0.5
RelaQ04207 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RelaQ04207 Gm27011-201ENSMUST00000182352 972 ntBASIC18.17■□□□□ 0.5
RelaQ04207 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.17■□□□□ 0.5
RelaQ04207 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RelaQ04207 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RelaQ04207 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.17■□□□□ 0.5
RelaQ04207 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RelaQ04207 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.16■□□□□ 0.5
RelaQ04207 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RelaQ04207 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RelaQ04207 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.16■□□□□ 0.5
RelaQ04207 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RelaQ04207 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
RelaQ04207 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.16■□□□□ 0.5
RelaQ04207 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RelaQ04207 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.16■□□□□ 0.5
RelaQ04207 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RelaQ04207 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
RelaQ04207 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.15■□□□□ 0.5
RelaQ04207 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.15■□□□□ 0.5
RelaQ04207 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Rab3c-203ENSMUST00000224180 967 ntBASIC18.15■□□□□ 0.5
RelaQ04207 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RelaQ04207 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RelaQ04207 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.14■□□□□ 0.5
RelaQ04207 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RelaQ04207 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RelaQ04207 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.14■□□□□ 0.5
RelaQ04207 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RelaQ04207 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RelaQ04207 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms