Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx3-2P97503 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.51■□□□□ 0.23
Nkx3-2P97503 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Gm7977-201ENSMUST00000193787 748 ntBASIC16.51■□□□□ 0.23
Nkx3-2P97503 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.51■□□□□ 0.23
Nkx3-2P97503 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.51■□□□□ 0.23
Nkx3-2P97503 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx3-2P97503 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.51■□□□□ 0.23
Nkx3-2P97503 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Gm5417-201ENSMUST00000079706 384 ntBASIC16.5■□□□□ 0.23
Nkx3-2P97503 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx3-2P97503 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.5■□□□□ 0.23
Nkx3-2P97503 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Nkx3-2P97503 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx3-2P97503 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Gm6433-201ENSMUST00000118634 875 ntBASIC16.48■□□□□ 0.23
Nkx3-2P97503 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nkx3-2P97503 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Gm3375-201ENSMUST00000203929 796 ntBASIC16.48■□□□□ 0.23
Nkx3-2P97503 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx3-2P97503 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.47■□□□□ 0.23
Nkx3-2P97503 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.47■□□□□ 0.23
Nkx3-2P97503 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.47■□□□□ 0.23
Nkx3-2P97503 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Nkx3-2P97503 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.47■□□□□ 0.23
Nkx3-2P97503 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx3-2P97503 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Gm10418-201ENSMUST00000100943 576 ntBASIC16.46■□□□□ 0.23
Nkx3-2P97503 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx3-2P97503 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nkx3-2P97503 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
Nkx3-2P97503 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Nkx3-2P97503 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx3-2P97503 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms