Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm18733-201ENSMUST00000173950 856 ntBASIC16.09■□□□□ 0.17
Cacna1aP97445 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.09■□□□□ 0.17
Cacna1aP97445 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1aP97445 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.09■□□□□ 0.17
Cacna1aP97445 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1aP97445 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1aP97445 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1aP97445 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1aP97445 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1aP97445 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1aP97445 Gm24841-201ENSMUST00000158676 357 ntBASIC16.08■□□□□ 0.17
Cacna1aP97445 Gm27389-201ENSMUST00000183622 195 ntBASIC16.08■□□□□ 0.17
Cacna1aP97445 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Cacna1aP97445 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1aP97445 Il3ra-202ENSMUST00000223589 738 ntBASIC16.08■□□□□ 0.17
Cacna1aP97445 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.17
Cacna1aP97445 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.08■□□□□ 0.16
Cacna1aP97445 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1aP97445 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cacna1aP97445 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1aP97445 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Cacna1aP97445 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1aP97445 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cacna1aP97445 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.08■□□□□ 0.16
Cacna1aP97445 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.08■□□□□ 0.16
Cacna1aP97445 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1aP97445 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.08■□□□□ 0.16
Cacna1aP97445 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1aP97445 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1aP97445 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Cacna1aP97445 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1aP97445 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.08■□□□□ 0.16
Cacna1aP97445 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1aP97445 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.08■□□□□ 0.16
Cacna1aP97445 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1aP97445 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.07■□□□□ 0.16
Cacna1aP97445 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.07■□□□□ 0.16
Cacna1aP97445 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1aP97445 Mir8098-201ENSMUST00000184011 137 ntBASIC16.07■□□□□ 0.16
Cacna1aP97445 Gm9731-201ENSMUST00000209480 747 ntBASIC16.07■□□□□ 0.16
Cacna1aP97445 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1aP97445 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1aP97445 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.06■□□□□ 0.16
Cacna1aP97445 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cacna1aP97445 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.06■□□□□ 0.16
Cacna1aP97445 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cacna1aP97445 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
Cacna1aP97445 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1aP97445 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1aP97445 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cacna1aP97445 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1aP97445 Gm10418-201ENSMUST00000100943 576 ntBASIC16.05■□□□□ 0.16
Cacna1aP97445 Gm11355-201ENSMUST00000121120 306 ntBASIC16.05■□□□□ 0.16
Cacna1aP97445 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.05■□□□□ 0.16
Cacna1aP97445 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.05■□□□□ 0.16
Cacna1aP97445 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cacna1aP97445 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1aP97445 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1aP97445 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1aP97445 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1aP97445 Tgds-204ENSMUST00000228543 1594 ntBASIC16.05■□□□□ 0.16
Cacna1aP97445 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.05■□□□□ 0.16
Cacna1aP97445 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1aP97445 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1aP97445 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.05■□□□□ 0.16
Cacna1aP97445 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1aP97445 Gm7213-201ENSMUST00000215977 950 ntBASIC16.05■□□□□ 0.16
Cacna1aP97445 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1aP97445 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cacna1aP97445 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1aP97445 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cacna1aP97445 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cacna1aP97445 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1aP97445 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cacna1aP97445 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1aP97445 Olfr129-201ENSMUST00000122318 993 ntBASIC16.04■□□□□ 0.16
Cacna1aP97445 Mir3081-201ENSMUST00000175305 84 ntBASIC16.04■□□□□ 0.16
Cacna1aP97445 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.04■□□□□ 0.16
Cacna1aP97445 Gm18206-201ENSMUST00000207027 926 ntBASIC16.04■□□□□ 0.16
Cacna1aP97445 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1aP97445 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1aP97445 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cacna1aP97445 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cacna1aP97445 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1aP97445 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1aP97445 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1aP97445 Gm28659-201ENSMUST00000188013 759 ntBASIC16.04■□□□□ 0.16
Cacna1aP97445 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1aP97445 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms