Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Gm715-201ENSMUST00000117865 831 ntBASIC15.59■□□□□ 0.09
SgcbP82349 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.59■□□□□ 0.09
SgcbP82349 Gm10252-201ENSMUST00000209541 832 ntBASIC15.59■□□□□ 0.09
SgcbP82349 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SgcbP82349 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SgcbP82349 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SgcbP82349 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SgcbP82349 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.58■□□□□ 0.08
SgcbP82349 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.58■□□□□ 0.08
SgcbP82349 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.58■□□□□ 0.08
SgcbP82349 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
SgcbP82349 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.58■□□□□ 0.08
SgcbP82349 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.58■□□□□ 0.08
SgcbP82349 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SgcbP82349 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SgcbP82349 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.57■□□□□ 0.08
SgcbP82349 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SgcbP82349 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.57■□□□□ 0.08
SgcbP82349 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Gm10517-202ENSMUST00000192970 758 ntBASIC15.57■□□□□ 0.08
SgcbP82349 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.57■□□□□ 0.08
SgcbP82349 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SgcbP82349 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SgcbP82349 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SgcbP82349 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SgcbP82349 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.57■□□□□ 0.08
SgcbP82349 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SgcbP82349 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SgcbP82349 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.56■□□□□ 0.08
SgcbP82349 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SgcbP82349 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SgcbP82349 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.56■□□□□ 0.08
SgcbP82349 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.56■□□□□ 0.08
SgcbP82349 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SgcbP82349 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.56■□□□□ 0.08
SgcbP82349 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SgcbP82349 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SgcbP82349 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SgcbP82349 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SgcbP82349 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SgcbP82349 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SgcbP82349 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SgcbP82349 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SgcbP82349 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SgcbP82349 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SgcbP82349 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SgcbP82349 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SgcbP82349 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SgcbP82349 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SgcbP82349 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms