Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx1P63006 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx1P63006 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx1P63006 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.2■□□□□ 0.34
Lhx1P63006 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.2■□□□□ 0.34
Lhx1P63006 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lhx1P63006 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.19■□□□□ 0.34
Lhx1P63006 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lhx1P63006 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.19■□□□□ 0.34
Lhx1P63006 Gm11539-201ENSMUST00000119837 557 ntBASIC17.19■□□□□ 0.34
Lhx1P63006 Gm13436-201ENSMUST00000120418 567 ntBASIC17.19■□□□□ 0.34
Lhx1P63006 Gm37025-201ENSMUST00000195159 829 ntBASIC17.19■□□□□ 0.34
Lhx1P63006 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lhx1P63006 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lhx1P63006 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx1P63006 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Gm13559-201ENSMUST00000120476 863 ntBASIC17.18■□□□□ 0.34
Lhx1P63006 Gm13836-201ENSMUST00000121159 501 ntBASIC17.18■□□□□ 0.34
Lhx1P63006 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lhx1P63006 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Lhx1P63006 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.18■□□□□ 0.34
Lhx1P63006 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Lhx1P63006 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx1P63006 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.17■□□□□ 0.34
Lhx1P63006 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.17■□□□□ 0.34
Lhx1P63006 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx1P63006 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Lhx1P63006 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx1P63006 Gm7638-201ENSMUST00000121348 967 ntBASIC17.16■□□□□ 0.34
Lhx1P63006 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.16■□□□□ 0.34
Lhx1P63006 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.16■□□□□ 0.34
Lhx1P63006 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx1P63006 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx1P63006 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx1P63006 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx1P63006 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Lhx1P63006 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx1P63006 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.16■□□□□ 0.34
Lhx1P63006 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx1P63006 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx1P63006 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx1P63006 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx1P63006 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx1P63006 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.15■□□□□ 0.34
Lhx1P63006 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx1P63006 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx1P63006 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx1P63006 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx1P63006 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lhx1P63006 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lhx1P63006 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lhx1P63006 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lhx1P63006 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lhx1P63006 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lhx1P63006 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.15■□□□□ 0.34
Lhx1P63006 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.15■□□□□ 0.34
Lhx1P63006 Gm9987-201ENSMUST00000069768 567 ntBASIC17.15■□□□□ 0.34
Lhx1P63006 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms