Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm6P62313 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm6P62313 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm6P62313 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm6P62313 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm6P62313 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lsm6P62313 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm6P62313 Gm12527-201ENSMUST00000117967 564 ntBASIC15.33■□□□□ 0.04
Lsm6P62313 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.33■□□□□ 0.04
Lsm6P62313 Gm6576-201ENSMUST00000169678 883 ntBASIC15.33■□□□□ 0.04
Lsm6P62313 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm6P62313 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm6P62313 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.33■□□□□ 0.04
Lsm6P62313 Gm37856-201ENSMUST00000191634 999 ntBASIC15.33■□□□□ 0.04
Lsm6P62313 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.33■□□□□ 0.04
Lsm6P62313 Gm18025-201ENSMUST00000221733 862 ntBASIC15.33■□□□□ 0.04
Lsm6P62313 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm6P62313 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Lsm6P62313 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm6P62313 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm6P62313 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm6P62313 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.32■□□□□ 0.04
Lsm6P62313 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lsm6P62313 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Lsm6P62313 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm6P62313 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm6P62313 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm6P62313 Trmt13-210ENSMUST00000198454 880 ntBASIC15.32■□□□□ 0.04
Lsm6P62313 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm6P62313 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.32■□□□□ 0.04
Lsm6P62313 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lsm6P62313 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lsm6P62313 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm6P62313 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm6P62313 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm6P62313 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm6P62313 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.32■□□□□ 0.04
Lsm6P62313 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm6P62313 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lsm6P62313 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm6P62313 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.31■□□□□ 0.04
Lsm6P62313 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.31■□□□□ 0.04
Lsm6P62313 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lsm6P62313 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.31■□□□□ 0.04
Lsm6P62313 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm6P62313 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm6P62313 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Lsm6P62313 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lsm6P62313 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.3■□□□□ 0.04
Lsm6P62313 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm6P62313 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.3■□□□□ 0.04
Lsm6P62313 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.3■□□□□ 0.04
Lsm6P62313 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.3■□□□□ 0.04
Lsm6P62313 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm6P62313 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm6P62313 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm6P62313 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm6P62313 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm6P62313 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm6P62313 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Lsm6P62313 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.29■□□□□ 0.04
Lsm6P62313 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.29■□□□□ 0.04
Lsm6P62313 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Lsm6P62313 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.29■□□□□ 0.04
Lsm6P62313 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.29■□□□□ 0.04
Lsm6P62313 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Lsm6P62313 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Lsm6P62313 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Lsm6P62313 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm6P62313 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Lsm6P62313 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm6P62313 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.28■□□□□ 0.04
Lsm6P62313 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms