Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp46P62069 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp46P62069 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp46P62069 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.28■□□□□ 0.52
Usp46P62069 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp46P62069 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.28■□□□□ 0.52
Usp46P62069 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Usp46P62069 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Usp46P62069 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.28■□□□□ 0.52
Usp46P62069 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp46P62069 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp46P62069 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp46P62069 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp46P62069 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp46P62069 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp46P62069 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Usp46P62069 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp46P62069 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp46P62069 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp46P62069 Gm10418-201ENSMUST00000100943 576 ntBASIC18.27■□□□□ 0.52
Usp46P62069 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.27■□□□□ 0.52
Usp46P62069 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp46P62069 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp46P62069 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.27■□□□□ 0.52
Usp46P62069 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp46P62069 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp46P62069 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Usp46P62069 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.26■□□□□ 0.51
Usp46P62069 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.26■□□□□ 0.51
Usp46P62069 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.26■□□□□ 0.51
Usp46P62069 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC18.26■□□□□ 0.51
Usp46P62069 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Gm38027-201ENSMUST00000192315 235 ntBASIC18.26■□□□□ 0.51
Usp46P62069 Gm7977-201ENSMUST00000193787 748 ntBASIC18.26■□□□□ 0.51
Usp46P62069 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.26■□□□□ 0.51
Usp46P62069 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp46P62069 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Usp46P62069 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp46P62069 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp46P62069 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp46P62069 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp46P62069 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Usp46P62069 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.25■□□□□ 0.51
Usp46P62069 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp46P62069 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp46P62069 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp46P62069 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp46P62069 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp46P62069 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp46P62069 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp46P62069 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp46P62069 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp46P62069 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp46P62069 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp46P62069 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Usp46P62069 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp46P62069 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.24■□□□□ 0.51
Usp46P62069 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp46P62069 Gm7889-201ENSMUST00000185591 958 ntBASIC18.24■□□□□ 0.51
Usp46P62069 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.24■□□□□ 0.51
Usp46P62069 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp46P62069 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp46P62069 Idnk-204ENSMUST00000226010 1898 ntBASIC18.24■□□□□ 0.51
Usp46P62069 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Usp46P62069 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Gm10231-201ENSMUST00000181584 441 ntBASIC18.23■□□□□ 0.51
Usp46P62069 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Gm10175-202ENSMUST00000208752 441 ntBASIC18.23■□□□□ 0.51
Usp46P62069 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Usp46P62069 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.23■□□□□ 0.51
Usp46P62069 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp46P62069 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp46P62069 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp46P62069 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms