Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubgcp3P58854 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubgcp3P58854 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubgcp3P58854 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubgcp3P58854 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.85■□□□□ 0.45
Tubgcp3P58854 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubgcp3P58854 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubgcp3P58854 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tubgcp3P58854 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.85■□□□□ 0.45
Tubgcp3P58854 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.85■□□□□ 0.45
Tubgcp3P58854 Gm27275-201ENSMUST00000184318 272 ntBASIC17.85■□□□□ 0.45
Tubgcp3P58854 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubgcp3P58854 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.84■□□□□ 0.45
Tubgcp3P58854 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Mir6349-201ENSMUST00000184059 97 ntBASIC17.84■□□□□ 0.45
Tubgcp3P58854 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tubgcp3P58854 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubgcp3P58854 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Tubgcp3P58854 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tubgcp3P58854 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Tubgcp3P58854 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tubgcp3P58854 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.83■□□□□ 0.45
Tubgcp3P58854 Gm15375-201ENSMUST00000119510 849 ntBASIC17.83■□□□□ 0.44
Tubgcp3P58854 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubgcp3P58854 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tubgcp3P58854 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.83■□□□□ 0.44
Tubgcp3P58854 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Tubgcp3P58854 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubgcp3P58854 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubgcp3P58854 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubgcp3P58854 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.82■□□□□ 0.44
Tubgcp3P58854 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tubgcp3P58854 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tubgcp3P58854 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Gm13158-201ENSMUST00000122007 736 ntBASIC17.81■□□□□ 0.44
Tubgcp3P58854 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.81■□□□□ 0.44
Tubgcp3P58854 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tubgcp3P58854 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Gm13401-201ENSMUST00000117074 291 ntBASIC17.8■□□□□ 0.44
Tubgcp3P58854 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.8■□□□□ 0.44
Tubgcp3P58854 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tubgcp3P58854 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp3P58854 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms