Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.53■□□□□ 0.72
Tpm1P58771 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.53■□□□□ 0.72
Tpm1P58771 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.53■□□□□ 0.72
Tpm1P58771 Gm13234-201ENSMUST00000120010 747 ntBASIC19.53■□□□□ 0.72
Tpm1P58771 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Tpm1P58771 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tpm1P58771 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tpm1P58771 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tpm1P58771 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.52■□□□□ 0.72
Tpm1P58771 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm1P58771 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm1P58771 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Tpm1P58771 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Tpm1P58771 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm1P58771 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.52■□□□□ 0.72
Tpm1P58771 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.52■□□□□ 0.72
Tpm1P58771 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tpm1P58771 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tpm1P58771 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tpm1P58771 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Tpm1P58771 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.51■□□□□ 0.71
Tpm1P58771 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.51■□□□□ 0.71
Tpm1P58771 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tpm1P58771 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Tpm1P58771 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm1P58771 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Tpm1P58771 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm1P58771 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Tpm1P58771 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm1P58771 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm1P58771 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm1P58771 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm1P58771 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm1P58771 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm1P58771 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm1P58771 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tpm1P58771 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tpm1P58771 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm1P58771 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm1P58771 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm1P58771 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Tpm1P58771 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.49■□□□□ 0.71
Tpm1P58771 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.49■□□□□ 0.71
Tpm1P58771 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm1P58771 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm1P58771 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm1P58771 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm1P58771 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm1P58771 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tpm1P58771 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Tpm1P58771 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Tpm1P58771 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.48■□□□□ 0.71
Tpm1P58771 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.48■□□□□ 0.71
Tpm1P58771 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Tpm1P58771 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Tpm1P58771 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tpm1P58771 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm1P58771 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm1P58771 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm1P58771 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Tpm1P58771 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.47■□□□□ 0.71
Tpm1P58771 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm1P58771 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm1P58771 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms