Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sssca1P56873 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sssca1P56873 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sssca1P56873 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.14□□□□□ -0.15
Sssca1P56873 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sssca1P56873 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.14□□□□□ -0.15
Sssca1P56873 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.14□□□□□ -0.15
Sssca1P56873 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.14□□□□□ -0.15
Sssca1P56873 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.14□□□□□ -0.15
Sssca1P56873 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sssca1P56873 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sssca1P56873 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sssca1P56873 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.13□□□□□ -0.15
Sssca1P56873 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.13□□□□□ -0.15
Sssca1P56873 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.13□□□□□ -0.15
Sssca1P56873 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sssca1P56873 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.13□□□□□ -0.15
Sssca1P56873 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.13□□□□□ -0.15
Sssca1P56873 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sssca1P56873 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.13□□□□□ -0.15
Sssca1P56873 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sssca1P56873 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sssca1P56873 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.12□□□□□ -0.15
Sssca1P56873 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.12□□□□□ -0.15
Sssca1P56873 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sssca1P56873 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sssca1P56873 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sssca1P56873 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.11□□□□□ -0.15
Sssca1P56873 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sssca1P56873 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Gm7514-201ENSMUST00000209475 934 ntBASIC14.11□□□□□ -0.15
Sssca1P56873 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Sssca1P56873 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sssca1P56873 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sssca1P56873 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms