Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.47■□□□□ 0.39
Lim2P56563 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Gm715-201ENSMUST00000117865 831 ntBASIC17.47■□□□□ 0.39
Lim2P56563 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.47■□□□□ 0.39
Lim2P56563 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.47■□□□□ 0.39
Lim2P56563 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.47■□□□□ 0.39
Lim2P56563 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Lim2P56563 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lim2P56563 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lim2P56563 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Lim2P56563 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lim2P56563 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Lim2P56563 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Lim2P56563 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lim2P56563 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lim2P56563 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lim2P56563 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Lim2P56563 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.45■□□□□ 0.38
Lim2P56563 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Lim2P56563 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lim2P56563 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.44■□□□□ 0.38
Lim2P56563 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.44■□□□□ 0.38
Lim2P56563 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.44■□□□□ 0.38
Lim2P56563 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.44■□□□□ 0.38
Lim2P56563 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lim2P56563 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.44■□□□□ 0.38
Lim2P56563 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.44■□□□□ 0.38
Lim2P56563 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lim2P56563 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lim2P56563 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.43■□□□□ 0.38
Lim2P56563 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.43■□□□□ 0.38
Lim2P56563 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
Lim2P56563 Gm13401-201ENSMUST00000117074 291 ntBASIC17.43■□□□□ 0.38
Lim2P56563 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.43■□□□□ 0.38
Lim2P56563 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.43■□□□□ 0.38
Lim2P56563 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.43■□□□□ 0.38
Lim2P56563 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.43■□□□□ 0.38
Lim2P56563 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Lim2P56563 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.43■□□□□ 0.38
Lim2P56563 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Lim2P56563 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lim2P56563 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms