Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm24270-201ENSMUST00000102326 57 ntBASIC18.47■□□□□ 0.55
NcanP55066 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NcanP55066 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NcanP55066 Gm24245-201ENSMUST00000157318 57 ntBASIC18.47■□□□□ 0.55
NcanP55066 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.47■□□□□ 0.55
NcanP55066 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.47■□□□□ 0.55
NcanP55066 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
NcanP55066 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.47■□□□□ 0.55
NcanP55066 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NcanP55066 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NcanP55066 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NcanP55066 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.46■□□□□ 0.55
NcanP55066 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.46■□□□□ 0.55
NcanP55066 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.46■□□□□ 0.55
NcanP55066 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.46■□□□□ 0.55
NcanP55066 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.46■□□□□ 0.55
NcanP55066 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NcanP55066 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NcanP55066 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NcanP55066 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
NcanP55066 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.46■□□□□ 0.54
NcanP55066 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NcanP55066 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NcanP55066 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NcanP55066 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NcanP55066 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
NcanP55066 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NcanP55066 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
NcanP55066 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.45■□□□□ 0.54
NcanP55066 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NcanP55066 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.45■□□□□ 0.54
NcanP55066 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NcanP55066 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NcanP55066 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.45■□□□□ 0.54
NcanP55066 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NcanP55066 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NcanP55066 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NcanP55066 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NcanP55066 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NcanP55066 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
NcanP55066 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NcanP55066 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NcanP55066 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NcanP55066 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NcanP55066 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NcanP55066 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NcanP55066 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NcanP55066 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NcanP55066 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NcanP55066 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NcanP55066 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.43■□□□□ 0.54
NcanP55066 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.43■□□□□ 0.54
NcanP55066 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NcanP55066 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NcanP55066 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
NcanP55066 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NcanP55066 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NcanP55066 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NcanP55066 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NcanP55066 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.42■□□□□ 0.54
NcanP55066 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
NcanP55066 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NcanP55066 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NcanP55066 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC18.42■□□□□ 0.54
NcanP55066 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.42■□□□□ 0.54
NcanP55066 Mir5131-201ENSMUST00000175426 93 ntBASIC18.42■□□□□ 0.54
NcanP55066 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.42■□□□□ 0.54
NcanP55066 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.42■□□□□ 0.54
NcanP55066 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NcanP55066 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NcanP55066 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
NcanP55066 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NcanP55066 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NcanP55066 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NcanP55066 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NcanP55066 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NcanP55066 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NcanP55066 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
NcanP55066 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms