Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.6■□□□□ 0.57
NrlP54846 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NrlP54846 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NrlP54846 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
NrlP54846 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NrlP54846 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Gm16061-201ENSMUST00000122167 857 ntBASIC18.59■□□□□ 0.57
NrlP54846 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.59■□□□□ 0.57
NrlP54846 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.59■□□□□ 0.57
NrlP54846 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NrlP54846 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.59■□□□□ 0.57
NrlP54846 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.59■□□□□ 0.57
NrlP54846 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NrlP54846 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.59■□□□□ 0.57
NrlP54846 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NrlP54846 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NrlP54846 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
NrlP54846 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
NrlP54846 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NrlP54846 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NrlP54846 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NrlP54846 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NrlP54846 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NrlP54846 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.58■□□□□ 0.56
NrlP54846 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NrlP54846 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NrlP54846 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NrlP54846 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NrlP54846 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NrlP54846 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NrlP54846 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NrlP54846 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NrlP54846 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NrlP54846 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NrlP54846 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NrlP54846 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NrlP54846 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.57■□□□□ 0.56
NrlP54846 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.57■□□□□ 0.56
NrlP54846 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NrlP54846 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NrlP54846 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.57■□□□□ 0.56
NrlP54846 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NrlP54846 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NrlP54846 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
NrlP54846 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NrlP54846 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.56■□□□□ 0.56
NrlP54846 Grk6-206ENSMUST00000224995 2971 ntBASIC18.56■□□□□ 0.56
NrlP54846 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NrlP54846 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.56■□□□□ 0.56
NrlP54846 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NrlP54846 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.56■□□□□ 0.56
NrlP54846 Gm14859-201ENSMUST00000117752 357 ntBASIC18.56■□□□□ 0.56
NrlP54846 Gm25016-201ENSMUST00000158399 131 ntBASIC18.56■□□□□ 0.56
NrlP54846 Gm27741-201ENSMUST00000185060 237 ntBASIC18.56■□□□□ 0.56
NrlP54846 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NrlP54846 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NrlP54846 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NrlP54846 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.56■□□□□ 0.56
NrlP54846 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NrlP54846 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NrlP54846 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.56■□□□□ 0.56
NrlP54846 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NrlP54846 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NrlP54846 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NrlP54846 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NrlP54846 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NrlP54846 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NrlP54846 Gm10418-201ENSMUST00000100943 576 ntBASIC18.55■□□□□ 0.56
NrlP54846 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.55■□□□□ 0.56
NrlP54846 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NrlP54846 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NrlP54846 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NrlP54846 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NrlP54846 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NrlP54846 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NrlP54846 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NrlP54846 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NrlP54846 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NrlP54846 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NrlP54846 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NrlP54846 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NrlP54846 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NrlP54846 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NrlP54846 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms