Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.71■□□□□ 0.27
Sox3P53784 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox3P53784 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox3P53784 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox3P53784 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox3P53784 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox3P53784 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox3P53784 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox3P53784 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Gm3375-201ENSMUST00000203929 796 ntBASIC16.7■□□□□ 0.26
Sox3P53784 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sox3P53784 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sox3P53784 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox3P53784 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox3P53784 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.69■□□□□ 0.26
Sox3P53784 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox3P53784 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.69■□□□□ 0.26
Sox3P53784 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox3P53784 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox3P53784 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sox3P53784 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Sox3P53784 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox3P53784 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox3P53784 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sox3P53784 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sox3P53784 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.68■□□□□ 0.26
Sox3P53784 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.68■□□□□ 0.26
Sox3P53784 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox3P53784 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sox3P53784 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sox3P53784 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Gm18032-201ENSMUST00000222541 538 ntBASIC16.67■□□□□ 0.26
Sox3P53784 Timm23-208ENSMUST00000226683 750 ntBASIC16.67■□□□□ 0.26
Sox3P53784 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.67■□□□□ 0.26
Sox3P53784 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sox3P53784 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.67■□□□□ 0.26
Sox3P53784 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.67■□□□□ 0.26
Sox3P53784 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sox3P53784 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sox3P53784 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox3P53784 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.66■□□□□ 0.26
Sox3P53784 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.66■□□□□ 0.26
Sox3P53784 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox3P53784 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sox3P53784 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms