Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lhx4P53776 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Gm10812-201ENSMUST00000099864 546 ntBASIC14.79□□□□□ -0.04
Lhx4P53776 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lhx4P53776 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Lhx4P53776 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx4P53776 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.78□□□□□ -0.04
Lhx4P53776 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.78□□□□□ -0.04
Lhx4P53776 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lhx4P53776 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lhx4P53776 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx4P53776 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx4P53776 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Lhx4P53776 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx4P53776 Flg-201ENSMUST00000050758 1488 ntBASIC14.77□□□□□ -0.04
Lhx4P53776 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx4P53776 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.77□□□□□ -0.04
Lhx4P53776 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx4P53776 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lhx4P53776 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.77□□□□□ -0.05
Lhx4P53776 Gm11249-201ENSMUST00000117071 859 ntBASIC14.77□□□□□ -0.05
Lhx4P53776 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Lhx4P53776 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx4P53776 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx4P53776 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx4P53776 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx4P53776 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.77□□□□□ -0.05
Lhx4P53776 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx4P53776 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.77□□□□□ -0.05
Lhx4P53776 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Lhx4P53776 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.77□□□□□ -0.05
Lhx4P53776 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx4P53776 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx4P53776 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx4P53776 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Lhx4P53776 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lhx4P53776 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Lhx4P53776 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.76□□□□□ -0.05
Lhx4P53776 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.76□□□□□ -0.05
Lhx4P53776 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.76□□□□□ -0.05
Lhx4P53776 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Lhx4P53776 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.76□□□□□ -0.05
Lhx4P53776 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.76□□□□□ -0.05
Lhx4P53776 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.76□□□□□ -0.05
Lhx4P53776 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Lhx4P53776 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Lhx4P53776 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Lhx4P53776 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lhx4P53776 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lhx4P53776 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lhx4P53776 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lhx4P53776 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Lhx4P53776 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lhx4P53776 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.75□□□□□ -0.05
Lhx4P53776 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lhx4P53776 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lhx4P53776 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Lhx4P53776 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lhx4P53776 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lhx4P53776 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lhx4P53776 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lhx4P53776 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lhx4P53776 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms