Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ccl9P51670 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccl9P51670 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Gm15039-201ENSMUST00000118914 875 ntBASIC15.34■□□□□ 0.05
Ccl9P51670 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.34■□□□□ 0.05
Ccl9P51670 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccl9P51670 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccl9P51670 Mtag2-201ENSMUST00000058665 714 ntBASIC15.34■□□□□ 0.05
Ccl9P51670 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ccl9P51670 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccl9P51670 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccl9P51670 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccl9P51670 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccl9P51670 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ccl9P51670 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccl9P51670 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccl9P51670 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Ccl9P51670 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccl9P51670 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccl9P51670 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccl9P51670 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccl9P51670 Gm26524-201ENSMUST00000192339 390 ntBASIC15.33■□□□□ 0.04
Ccl9P51670 Gm5408-201ENSMUST00000197998 747 ntBASIC15.33■□□□□ 0.04
Ccl9P51670 Gm44549-201ENSMUST00000208351 577 ntBASIC15.33■□□□□ 0.04
Ccl9P51670 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.33■□□□□ 0.04
Ccl9P51670 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccl9P51670 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccl9P51670 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccl9P51670 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.33■□□□□ 0.04
Ccl9P51670 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccl9P51670 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccl9P51670 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccl9P51670 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccl9P51670 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccl9P51670 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccl9P51670 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccl9P51670 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccl9P51670 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccl9P51670 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccl9P51670 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.32■□□□□ 0.04
Ccl9P51670 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ccl9P51670 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.32■□□□□ 0.04
Ccl9P51670 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccl9P51670 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ccl9P51670 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccl9P51670 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccl9P51670 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccl9P51670 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccl9P51670 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccl9P51670 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccl9P51670 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccl9P51670 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccl9P51670 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccl9P51670 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccl9P51670 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccl9P51670 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
Ccl9P51670 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms