Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.72■□□□□ 0.43
Lhx3P50481 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.72■□□□□ 0.43
Lhx3P50481 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lhx3P50481 Rarb-207ENSMUST00000225921 2756 ntBASIC17.72■□□□□ 0.43
Lhx3P50481 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Lhx3P50481 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lhx3P50481 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Lhx3P50481 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 Gm37025-201ENSMUST00000195159 829 ntBASIC17.72■□□□□ 0.43
Lhx3P50481 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.72■□□□□ 0.43
Lhx3P50481 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx3P50481 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx3P50481 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Lhx3P50481 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx3P50481 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx3P50481 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lhx3P50481 Gm13559-201ENSMUST00000120476 863 ntBASIC17.71■□□□□ 0.43
Lhx3P50481 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.71■□□□□ 0.43
Lhx3P50481 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx3P50481 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Lhx3P50481 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lhx3P50481 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.7■□□□□ 0.42
Lhx3P50481 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.7■□□□□ 0.42
Lhx3P50481 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Lhx3P50481 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.7■□□□□ 0.42
Lhx3P50481 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lhx3P50481 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.7■□□□□ 0.42
Lhx3P50481 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.7■□□□□ 0.42
Lhx3P50481 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx3P50481 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Lhx3P50481 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Lhx3P50481 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.69■□□□□ 0.42
Lhx3P50481 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.69■□□□□ 0.42
Lhx3P50481 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Gm17661-201ENSMUST00000170317 270 ntBASIC17.69■□□□□ 0.42
Lhx3P50481 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.69■□□□□ 0.42
Lhx3P50481 Gm27463-201ENSMUST00000183569 57 ntBASIC17.69■□□□□ 0.42
Lhx3P50481 Gm9731-201ENSMUST00000209480 747 ntBASIC17.69■□□□□ 0.42
Lhx3P50481 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Gm7791-201ENSMUST00000219066 539 ntBASIC17.69■□□□□ 0.42
Lhx3P50481 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.69■□□□□ 0.42
Lhx3P50481 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx3P50481 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Lhx3P50481 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.68■□□□□ 0.42
Lhx3P50481 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lhx3P50481 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Mir7071-201ENSMUST00000184847 69 ntBASIC17.68■□□□□ 0.42
Lhx3P50481 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.68■□□□□ 0.42
Lhx3P50481 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Lhx3P50481 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx3P50481 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx3P50481 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lhx3P50481 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.67■□□□□ 0.42
Lhx3P50481 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.67■□□□□ 0.42
Lhx3P50481 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Lhx3P50481 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms