Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.69■□□□□ 0.74
Brca1P48754 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.69■□□□□ 0.74
Brca1P48754 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brca1P48754 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brca1P48754 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.68■□□□□ 0.74
Brca1P48754 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brca1P48754 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.68■□□□□ 0.74
Brca1P48754 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.68■□□□□ 0.74
Brca1P48754 Gm18206-201ENSMUST00000207027 926 ntBASIC19.68■□□□□ 0.74
Brca1P48754 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.68■□□□□ 0.74
Brca1P48754 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.68■□□□□ 0.74
Brca1P48754 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Brca1P48754 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.68■□□□□ 0.74
Brca1P48754 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brca1P48754 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.68■□□□□ 0.74
Brca1P48754 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brca1P48754 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Brca1P48754 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brca1P48754 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.67■□□□□ 0.74
Brca1P48754 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brca1P48754 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.67■□□□□ 0.74
Brca1P48754 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brca1P48754 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Brca1P48754 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brca1P48754 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Brca1P48754 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brca1P48754 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brca1P48754 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brca1P48754 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brca1P48754 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.67■□□□□ 0.74
Brca1P48754 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brca1P48754 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Brca1P48754 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.66■□□□□ 0.74
Brca1P48754 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Brca1P48754 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Brca1P48754 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Brca1P48754 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Brca1P48754 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brca1P48754 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.66■□□□□ 0.74
Brca1P48754 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brca1P48754 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brca1P48754 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brca1P48754 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brca1P48754 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brca1P48754 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Brca1P48754 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brca1P48754 Iqck-206ENSMUST00000208658 2891 ntBASIC19.65■□□□□ 0.74
Brca1P48754 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brca1P48754 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brca1P48754 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brca1P48754 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brca1P48754 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brca1P48754 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Brca1P48754 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.65■□□□□ 0.74
Brca1P48754 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.65■□□□□ 0.74
Brca1P48754 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.65■□□□□ 0.74
Brca1P48754 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Brca1P48754 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Brca1P48754 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Brca1P48754 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brca1P48754 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.64■□□□□ 0.73
Brca1P48754 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brca1P48754 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Brca1P48754 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brca1P48754 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Brca1P48754 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brca1P48754 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Brca1P48754 Golph3-205ENSMUST00000228671 2842 ntBASIC19.63■□□□□ 0.73
Brca1P48754 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Brca1P48754 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca1P48754 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Brca1P48754 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Brca1P48754 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.63■□□□□ 0.73
Brca1P48754 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca1P48754 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca1P48754 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca1P48754 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brca1P48754 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.63■□□□□ 0.73
Brca1P48754 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.63■□□□□ 0.73
Brca1P48754 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brca1P48754 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.62■□□□□ 0.73
Brca1P48754 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.62■□□□□ 0.73
Brca1P48754 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.62■□□□□ 0.73
Brca1P48754 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brca1P48754 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Brca1P48754 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brca1P48754 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brca1P48754 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brca1P48754 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.62■□□□□ 0.73
Brca1P48754 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.62■□□□□ 0.73
Brca1P48754 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brca1P48754 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Brca1P48754 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Brca1P48754 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.62■□□□□ 0.73
Brca1P48754 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
Brca1P48754 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brca1P48754 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brca1P48754 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.61■□□□□ 0.73
Brca1P48754 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.61■□□□□ 0.73
Brca1P48754 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms