Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vps4bP46467 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Gm22240-201ENSMUST00000175225 82 ntBASIC17.74■□□□□ 0.43
Vps4bP46467 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.74■□□□□ 0.43
Vps4bP46467 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.74■□□□□ 0.43
Vps4bP46467 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps4bP46467 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Vps4bP46467 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vps4bP46467 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vps4bP46467 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vps4bP46467 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps4bP46467 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.72■□□□□ 0.43
Vps4bP46467 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.72■□□□□ 0.43
Vps4bP46467 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Vps4bP46467 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.72■□□□□ 0.43
Vps4bP46467 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.72■□□□□ 0.43
Vps4bP46467 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.72■□□□□ 0.43
Vps4bP46467 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Vps4bP46467 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps4bP46467 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.72■□□□□ 0.43
Vps4bP46467 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Gm11927-201ENSMUST00000118472 759 ntBASIC17.71■□□□□ 0.43
Vps4bP46467 Gm10653-202ENSMUST00000139570 835 ntBASIC17.71■□□□□ 0.43
Vps4bP46467 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.71■□□□□ 0.43
Vps4bP46467 Gm20760-201ENSMUST00000179197 648 ntBASIC17.71■□□□□ 0.43
Vps4bP46467 Mir8112-201ENSMUST00000184382 131 ntBASIC17.71■□□□□ 0.43
Vps4bP46467 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.71■□□□□ 0.43
Vps4bP46467 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Vps4bP46467 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.71■□□□□ 0.43
Vps4bP46467 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.71■□□□□ 0.43
Vps4bP46467 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps4bP46467 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps4bP46467 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps4bP46467 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps4bP46467 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vps4bP46467 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.7■□□□□ 0.42
Vps4bP46467 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps4bP46467 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps4bP46467 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vps4bP46467 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps4bP46467 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vps4bP46467 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps4bP46467 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps4bP46467 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps4bP46467 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps4bP46467 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vps4bP46467 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 Mir2861-201ENSMUST00000175539 82 ntBASIC17.69■□□□□ 0.42
Vps4bP46467 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms