Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc2P43407 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc2P43407 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc2P43407 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sdc2P43407 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sdc2P43407 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Sdc2P43407 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Gm10418-201ENSMUST00000100943 576 ntBASIC19.62■□□□□ 0.73
Sdc2P43407 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Sdc2P43407 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sdc2P43407 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.62■□□□□ 0.73
Sdc2P43407 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.62■□□□□ 0.73
Sdc2P43407 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.62■□□□□ 0.73
Sdc2P43407 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sdc2P43407 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.61■□□□□ 0.73
Sdc2P43407 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Mir2861-201ENSMUST00000175539 82 ntBASIC19.61■□□□□ 0.73
Sdc2P43407 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sdc2P43407 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sdc2P43407 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sdc2P43407 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdc2P43407 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.6■□□□□ 0.73
Sdc2P43407 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdc2P43407 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.6■□□□□ 0.73
Sdc2P43407 Mir8112-201ENSMUST00000184382 131 ntBASIC19.6■□□□□ 0.73
Sdc2P43407 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.6■□□□□ 0.73
Sdc2P43407 Gm37179-201ENSMUST00000194862 823 ntBASIC19.6■□□□□ 0.73
Sdc2P43407 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.6■□□□□ 0.73
Sdc2P43407 Mtag2-201ENSMUST00000058665 714 ntBASIC19.6■□□□□ 0.73
Sdc2P43407 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sdc2P43407 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sdc2P43407 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sdc2P43407 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sdc2P43407 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sdc2P43407 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sdc2P43407 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sdc2P43407 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sdc2P43407 Gm5408-201ENSMUST00000197998 747 ntBASIC19.59■□□□□ 0.73
Sdc2P43407 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
Sdc2P43407 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sdc2P43407 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Sdc2P43407 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sdc2P43407 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.58■□□□□ 0.73
Sdc2P43407 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sdc2P43407 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sdc2P43407 Gm12933-201ENSMUST00000120203 872 ntBASIC19.58■□□□□ 0.72
Sdc2P43407 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.58■□□□□ 0.72
Sdc2P43407 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.58■□□□□ 0.72
Sdc2P43407 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Sdc2P43407 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.58■□□□□ 0.72
Sdc2P43407 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sdc2P43407 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Sdc2P43407 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc2P43407 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc2P43407 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.57■□□□□ 0.72
Sdc2P43407 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc2P43407 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sdc2P43407 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Sdc2P43407 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Sdc2P43407 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.57■□□□□ 0.72
Sdc2P43407 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc2P43407 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc2P43407 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc2P43407 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc2P43407 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms