Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.61□□□□□ -0.07
Hmx3P42581 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.61□□□□□ -0.07
Hmx3P42581 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmx3P42581 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmx3P42581 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmx3P42581 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hmx3P42581 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmx3P42581 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hmx3P42581 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.6□□□□□ -0.07
Hmx3P42581 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Hmx3P42581 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.6□□□□□ -0.07
Hmx3P42581 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.6□□□□□ -0.07
Hmx3P42581 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.6□□□□□ -0.07
Hmx3P42581 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Hmx3P42581 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Hmx3P42581 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmx3P42581 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Hmx3P42581 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.59□□□□□ -0.07
Hmx3P42581 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Hmx3P42581 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Hmx3P42581 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Hmx3P42581 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmx3P42581 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hmx3P42581 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hmx3P42581 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hmx3P42581 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hmx3P42581 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.58□□□□□ -0.08
Hmx3P42581 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.58□□□□□ -0.08
Hmx3P42581 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.58□□□□□ -0.08
Hmx3P42581 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Hmx3P42581 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmx3P42581 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.57□□□□□ -0.08
Hmx3P42581 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.57□□□□□ -0.08
Hmx3P42581 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmx3P42581 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmx3P42581 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmx3P42581 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmx3P42581 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmx3P42581 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Hmx3P42581 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmx3P42581 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms