Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl12P40224 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.02■□□□□ 0.48
Cxcl12P40224 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.02■□□□□ 0.48
Cxcl12P40224 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cxcl12P40224 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cxcl12P40224 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Cxcl12P40224 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcl12P40224 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcl12P40224 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcl12P40224 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cxcl12P40224 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcl12P40224 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcl12P40224 Gm27525-201ENSMUST00000184465 107 ntBASIC18.01■□□□□ 0.47
Cxcl12P40224 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.01■□□□□ 0.47
Cxcl12P40224 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.01■□□□□ 0.47
Cxcl12P40224 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcl12P40224 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cxcl12P40224 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cxcl12P40224 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18■□□□□ 0.47
Cxcl12P40224 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cxcl12P40224 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl12P40224 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl12P40224 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cxcl12P40224 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Cxcl12P40224 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cxcl12P40224 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cxcl12P40224 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18■□□□□ 0.47
Cxcl12P40224 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18■□□□□ 0.47
Cxcl12P40224 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Cxcl12P40224 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cxcl12P40224 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cxcl12P40224 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl12P40224 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl12P40224 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl12P40224 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cxcl12P40224 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.99■□□□□ 0.47
Cxcl12P40224 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Cxcl12P40224 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.99■□□□□ 0.47
Cxcl12P40224 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cxcl12P40224 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cxcl12P40224 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cxcl12P40224 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Cxcl12P40224 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.98■□□□□ 0.47
Cxcl12P40224 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cxcl12P40224 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.98■□□□□ 0.47
Cxcl12P40224 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cxcl12P40224 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.98■□□□□ 0.47
Cxcl12P40224 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.98■□□□□ 0.47
Cxcl12P40224 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl12P40224 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl12P40224 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl12P40224 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.97■□□□□ 0.47
Cxcl12P40224 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.97■□□□□ 0.47
Cxcl12P40224 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.97■□□□□ 0.47
Cxcl12P40224 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl12P40224 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl12P40224 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Cxcl12P40224 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl12P40224 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl12P40224 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl12P40224 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl12P40224 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cxcl12P40224 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.96■□□□□ 0.47
Cxcl12P40224 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cxcl12P40224 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.96■□□□□ 0.47
Cxcl12P40224 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.96■□□□□ 0.47
Cxcl12P40224 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms