Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RetP35546 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RetP35546 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.35■□□□□ 0.21
RetP35546 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.35■□□□□ 0.21
RetP35546 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RetP35546 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.35■□□□□ 0.21
RetP35546 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.35■□□□□ 0.21
RetP35546 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.35■□□□□ 0.21
RetP35546 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.35■□□□□ 0.21
RetP35546 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RetP35546 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RetP35546 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.34■□□□□ 0.21
RetP35546 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Gm11927-201ENSMUST00000118472 759 ntBASIC16.34■□□□□ 0.21
RetP35546 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.34■□□□□ 0.21
RetP35546 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
RetP35546 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RetP35546 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RetP35546 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.34■□□□□ 0.21
RetP35546 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RetP35546 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RetP35546 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RetP35546 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RetP35546 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RetP35546 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RetP35546 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RetP35546 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RetP35546 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RetP35546 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RetP35546 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.33■□□□□ 0.2
RetP35546 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RetP35546 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RetP35546 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RetP35546 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RetP35546 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RetP35546 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RetP35546 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RetP35546 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RetP35546 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RetP35546 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
RetP35546 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RetP35546 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.32■□□□□ 0.2
RetP35546 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RetP35546 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RetP35546 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RetP35546 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RetP35546 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RetP35546 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RetP35546 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RetP35546 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RetP35546 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RetP35546 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.31■□□□□ 0.2
RetP35546 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RetP35546 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms