Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a13P31649 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a13P31649 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Slc6a13P31649 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slc6a13P31649 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a13P31649 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slc6a13P31649 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a13P31649 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Slc6a13P31649 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Slc6a13P31649 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.72■□□□□ 0.43
Slc6a13P31649 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc6a13P31649 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
Slc6a13P31649 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc6a13P31649 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.72■□□□□ 0.43
Slc6a13P31649 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Slc6a13P31649 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a13P31649 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a13P31649 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a13P31649 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a13P31649 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Slc6a13P31649 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a13P31649 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.71■□□□□ 0.43
Slc6a13P31649 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.71■□□□□ 0.43
Slc6a13P31649 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.71■□□□□ 0.43
Slc6a13P31649 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Slc6a13P31649 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a13P31649 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a13P31649 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a13P31649 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a13P31649 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a13P31649 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Slc6a13P31649 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Slc6a13P31649 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Slc6a13P31649 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.7■□□□□ 0.42
Slc6a13P31649 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.7■□□□□ 0.42
Slc6a13P31649 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Slc6a13P31649 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.7■□□□□ 0.42
Slc6a13P31649 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a13P31649 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.69■□□□□ 0.42
Slc6a13P31649 Gm715-201ENSMUST00000117865 831 ntBASIC17.69■□□□□ 0.42
Slc6a13P31649 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.69■□□□□ 0.42
Slc6a13P31649 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Slc6a13P31649 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.69■□□□□ 0.42
Slc6a13P31649 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Slc6a13P31649 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Slc6a13P31649 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a13P31649 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.68■□□□□ 0.42
Slc6a13P31649 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a13P31649 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a13P31649 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.68■□□□□ 0.42
Slc6a13P31649 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a13P31649 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.68■□□□□ 0.42
Slc6a13P31649 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc6a13P31649 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc6a13P31649 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Slc6a13P31649 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a13P31649 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a13P31649 Gm24841-201ENSMUST00000158676 357 ntBASIC17.68■□□□□ 0.42
Slc6a13P31649 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc6a13P31649 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms