Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.04■□□□□ -0
Slc6a1P31648 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Slc6a1P31648 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.04■□□□□ -0
Slc6a1P31648 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a1P31648 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a1P31648 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.04■□□□□ -0
Slc6a1P31648 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a1P31648 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a1P31648 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.04■□□□□ -0
Slc6a1P31648 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.03■□□□□ -0
Slc6a1P31648 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Slc6a1P31648 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.03■□□□□ -0
Slc6a1P31648 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Gm10849-201ENSMUST00000100397 618 ntBASIC15.03■□□□□ -0
Slc6a1P31648 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Gm27405-201ENSMUST00000184201 112 ntBASIC15.03■□□□□ -0
Slc6a1P31648 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.03■□□□□ -0
Slc6a1P31648 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.03■□□□□ -0
Slc6a1P31648 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.03■□□□□ -0
Slc6a1P31648 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Slc6a1P31648 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.03■□□□□ -0
Slc6a1P31648 Idnk-204ENSMUST00000226010 1898 ntBASIC15.03■□□□□ -0
Slc6a1P31648 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc6a1P31648 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a1P31648 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a1P31648 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a1P31648 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a1P31648 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a1P31648 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a1P31648 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Slc6a1P31648 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a1P31648 Gm42569-201ENSMUST00000200539 472 ntBASIC15.02■□□□□ -0
Slc6a1P31648 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc6a1P31648 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a1P31648 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a1P31648 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.02□□□□□ -0.01
Slc6a1P31648 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.02□□□□□ -0.01
Slc6a1P31648 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a1P31648 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a1P31648 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a1P31648 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a1P31648 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
Slc6a1P31648 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.01□□□□□ -0.01
Slc6a1P31648 Gm7291-201ENSMUST00000199147 382 ntBASIC15.01□□□□□ -0.01
Slc6a1P31648 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.01□□□□□ -0.01
Slc6a1P31648 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Slc6a1P31648 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.01□□□□□ -0.01
Slc6a1P31648 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Slc6a1P31648 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a1P31648 Gm26917-202ENSMUST00000192833 3329 ntBASIC15□□□□□ -0.01
Slc6a1P31648 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15□□□□□ -0.01
Slc6a1P31648 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15□□□□□ -0.01
Slc6a1P31648 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Slc6a1P31648 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a1P31648 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms