Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RxrbP28704 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.56■□□□□ 0.4
RxrbP28704 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RxrbP28704 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RxrbP28704 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RxrbP28704 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RxrbP28704 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RxrbP28704 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.54■□□□□ 0.4
RxrbP28704 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.54■□□□□ 0.4
RxrbP28704 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RxrbP28704 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
RxrbP28704 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.54■□□□□ 0.4
RxrbP28704 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RxrbP28704 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RxrbP28704 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RxrbP28704 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RxrbP28704 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RxrbP28704 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RxrbP28704 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.53■□□□□ 0.4
RxrbP28704 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RxrbP28704 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RxrbP28704 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RxrbP28704 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RxrbP28704 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RxrbP28704 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RxrbP28704 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RxrbP28704 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RxrbP28704 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RxrbP28704 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RxrbP28704 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RxrbP28704 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RxrbP28704 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RxrbP28704 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RxrbP28704 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RxrbP28704 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RxrbP28704 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RxrbP28704 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RxrbP28704 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RxrbP28704 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RxrbP28704 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.51■□□□□ 0.39
RxrbP28704 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.51■□□□□ 0.39
RxrbP28704 Gm7514-201ENSMUST00000209475 934 ntBASIC17.51■□□□□ 0.39
RxrbP28704 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RxrbP28704 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RxrbP28704 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms