Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col8a2P25318 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.61□□□□□ -0.07
Col8a2P25318 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Col8a2P25318 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
Col8a2P25318 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Col8a2P25318 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Gm7889-201ENSMUST00000185591 958 ntBASIC14.6□□□□□ -0.07
Col8a2P25318 Gm38027-201ENSMUST00000192315 235 ntBASIC14.6□□□□□ -0.07
Col8a2P25318 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col8a2P25318 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.6□□□□□ -0.07
Col8a2P25318 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col8a2P25318 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.59□□□□□ -0.07
Col8a2P25318 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Col8a2P25318 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Col8a2P25318 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.59□□□□□ -0.07
Col8a2P25318 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Col8a2P25318 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.59□□□□□ -0.07
Col8a2P25318 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Odf3b-204ENSMUST00000227834 930 ntBASIC14.59□□□□□ -0.07
Col8a2P25318 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Col8a2P25318 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col8a2P25318 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col8a2P25318 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col8a2P25318 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Col8a2P25318 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Col8a2P25318 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Col8a2P25318 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col8a2P25318 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col8a2P25318 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col8a2P25318 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col8a2P25318 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col8a2P25318 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col8a2P25318 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.57□□□□□ -0.08
Col8a2P25318 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.57□□□□□ -0.08
Col8a2P25318 Gm13836-201ENSMUST00000121159 501 ntBASIC14.57□□□□□ -0.08
Col8a2P25318 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.57□□□□□ -0.08
Col8a2P25318 Gm24841-201ENSMUST00000158676 357 ntBASIC14.57□□□□□ -0.08
Col8a2P25318 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col8a2P25318 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.57□□□□□ -0.08
Col8a2P25318 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col8a2P25318 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col8a2P25318 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col8a2P25318 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.57□□□□□ -0.08
Col8a2P25318 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col8a2P25318 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Col8a2P25318 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.56□□□□□ -0.08
Col8a2P25318 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.56□□□□□ -0.08
Col8a2P25318 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.56□□□□□ -0.08
Col8a2P25318 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.56□□□□□ -0.08
Col8a2P25318 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col8a2P25318 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Col8a2P25318 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms