Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.2■□□□□ 0.18
Tnfrsf1bP25119 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.2■□□□□ 0.18
Tnfrsf1bP25119 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf1bP25119 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1bP25119 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Gm4974-201ENSMUST00000209974 875 ntBASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1bP25119 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1bP25119 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.16■□□□□ 0.18
Tnfrsf1bP25119 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Rarb-207ENSMUST00000225921 2756 ntBASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1bP25119 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Tnfrsf1bP25119 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms