Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdx1P18111 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdx1P18111 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cdx1P18111 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Cdx1P18111 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdx1P18111 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.11□□□□□ -0.15
Cdx1P18111 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx1P18111 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdx1P18111 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Cdx1P18111 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.1□□□□□ -0.15
Cdx1P18111 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdx1P18111 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdx1P18111 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdx1P18111 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx1P18111 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdx1P18111 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdx1P18111 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.09□□□□□ -0.15
Cdx1P18111 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.09□□□□□ -0.15
Cdx1P18111 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.09□□□□□ -0.15
Cdx1P18111 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdx1P18111 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx1P18111 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdx1P18111 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cdx1P18111 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cdx1P18111 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdx1P18111 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdx1P18111 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cdx1P18111 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.08□□□□□ -0.16
Cdx1P18111 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdx1P18111 Gm27011-201ENSMUST00000182352 972 ntBASIC14.08□□□□□ -0.16
Cdx1P18111 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.08□□□□□ -0.16
Cdx1P18111 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cdx1P18111 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdx1P18111 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cdx1P18111 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdx1P18111 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 Reep4-203ENSMUST00000226563 1444 ntBASIC14.07□□□□□ -0.16
Cdx1P18111 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdx1P18111 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cdx1P18111 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdx1P18111 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms