Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim30aP15533 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30aP15533 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim30aP15533 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30aP15533 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Trim30aP15533 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim30aP15533 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Mir6538-201ENSMUST00000183713 110 ntBASIC19.28■□□□□ 0.68
Trim30aP15533 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim30aP15533 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim30aP15533 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim30aP15533 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30aP15533 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30aP15533 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30aP15533 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim30aP15533 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Trim30aP15533 Gm13216-201ENSMUST00000117145 591 ntBASIC19.27■□□□□ 0.68
Trim30aP15533 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.27■□□□□ 0.68
Trim30aP15533 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.27■□□□□ 0.67
Trim30aP15533 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim30aP15533 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim30aP15533 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim30aP15533 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim30aP15533 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim30aP15533 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim30aP15533 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim30aP15533 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim30aP15533 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim30aP15533 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Trim30aP15533 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim30aP15533 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim30aP15533 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim30aP15533 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.25■□□□□ 0.67
Trim30aP15533 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.25■□□□□ 0.67
Trim30aP15533 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim30aP15533 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim30aP15533 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 Idnk-204ENSMUST00000226010 1898 ntBASIC19.24■□□□□ 0.67
Trim30aP15533 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim30aP15533 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim30aP15533 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim30aP15533 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30aP15533 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30aP15533 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30aP15533 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30aP15533 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim30aP15533 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim30aP15533 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.23■□□□□ 0.67
Trim30aP15533 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30aP15533 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim30aP15533 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30aP15533 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim30aP15533 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim30aP15533 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms