Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm18025-201ENSMUST00000221733 862 ntBASIC17.82■□□□□ 0.44
Rb1P13405 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.82■□□□□ 0.44
Rb1P13405 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rb1P13405 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Rb1P13405 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.82■□□□□ 0.44
Rb1P13405 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rb1P13405 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rb1P13405 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rb1P13405 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rb1P13405 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rb1P13405 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.82■□□□□ 0.44
Rb1P13405 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.81■□□□□ 0.44
Rb1P13405 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.81■□□□□ 0.44
Rb1P13405 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rb1P13405 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.81■□□□□ 0.44
Rb1P13405 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.81■□□□□ 0.44
Rb1P13405 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.81■□□□□ 0.44
Rb1P13405 Mtag2-201ENSMUST00000058665 714 ntBASIC17.81■□□□□ 0.44
Rb1P13405 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.81■□□□□ 0.44
Rb1P13405 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.81■□□□□ 0.44
Rb1P13405 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rb1P13405 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rb1P13405 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rb1P13405 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rb1P13405 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rb1P13405 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rb1P13405 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rb1P13405 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rb1P13405 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.79■□□□□ 0.44
Rb1P13405 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rb1P13405 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.79■□□□□ 0.44
Rb1P13405 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.79■□□□□ 0.44
Rb1P13405 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rb1P13405 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rb1P13405 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rb1P13405 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rb1P13405 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rb1P13405 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Rb1P13405 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rb1P13405 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.78■□□□□ 0.44
Rb1P13405 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.78■□□□□ 0.44
Rb1P13405 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rb1P13405 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.78■□□□□ 0.44
Rb1P13405 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rb1P13405 Gm38285-201ENSMUST00000192928 922 ntBASIC17.78■□□□□ 0.44
Rb1P13405 Timm23-208ENSMUST00000226683 750 ntBASIC17.78■□□□□ 0.44
Rb1P13405 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rb1P13405 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rb1P13405 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.78■□□□□ 0.44
Rb1P13405 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rb1P13405 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rb1P13405 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.78■□□□□ 0.44
Rb1P13405 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rb1P13405 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.78■□□□□ 0.44
Rb1P13405 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.77■□□□□ 0.44
Rb1P13405 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rb1P13405 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.77■□□□□ 0.44
Rb1P13405 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rb1P13405 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rb1P13405 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.77■□□□□ 0.44
Rb1P13405 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rb1P13405 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rb1P13405 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rb1P13405 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rb1P13405 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rb1P13405 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Rb1P13405 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rb1P13405 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rb1P13405 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rb1P13405 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms