Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ercc1P07903 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.65□□□□□ -0.06
Ercc1P07903 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.65□□□□□ -0.06
Ercc1P07903 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ercc1P07903 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ercc1P07903 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ercc1P07903 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.64□□□□□ -0.07
Ercc1P07903 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Ercc1P07903 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ercc1P07903 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ercc1P07903 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Ercc1P07903 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Gm22325-201ENSMUST00000158904 308 ntBASIC14.64□□□□□ -0.07
Ercc1P07903 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.64□□□□□ -0.07
Ercc1P07903 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Ercc1P07903 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.64□□□□□ -0.07
Ercc1P07903 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ercc1P07903 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ercc1P07903 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.63□□□□□ -0.07
Ercc1P07903 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ercc1P07903 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ercc1P07903 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.63□□□□□ -0.07
Ercc1P07903 Idnk-204ENSMUST00000226010 1898 ntBASIC14.63□□□□□ -0.07
Ercc1P07903 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ercc1P07903 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ercc1P07903 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Haglr-201ENSMUST00000100000 2085 ntBASIC14.62□□□□□ -0.07
Ercc1P07903 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.62□□□□□ -0.07
Ercc1P07903 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ercc1P07903 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Ercc1P07903 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ercc1P07903 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.62□□□□□ -0.07
Ercc1P07903 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Ercc1P07903 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.62□□□□□ -0.07
Ercc1P07903 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.62□□□□□ -0.07
Ercc1P07903 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms