Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Gm26571-201ENSMUST00000181399 666 ntBASIC16.74■□□□□ 0.27
Hcn3O88705 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.74■□□□□ 0.27
Hcn3O88705 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.74■□□□□ 0.27
Hcn3O88705 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hcn3O88705 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hcn3O88705 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.74■□□□□ 0.27
Hcn3O88705 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn3O88705 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.73■□□□□ 0.27
Hcn3O88705 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.73■□□□□ 0.27
Hcn3O88705 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Hcn3O88705 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.73■□□□□ 0.27
Hcn3O88705 AV356131-201ENSMUST00000206201 750 ntBASIC16.73■□□□□ 0.27
Hcn3O88705 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Hcn3O88705 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hcn3O88705 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Hcn3O88705 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn3O88705 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hcn3O88705 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hcn3O88705 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Hcn3O88705 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.72■□□□□ 0.27
Hcn3O88705 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Hcn3O88705 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hcn3O88705 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn3O88705 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn3O88705 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn3O88705 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.71■□□□□ 0.27
Hcn3O88705 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Hcn3O88705 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn3O88705 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Hcn3O88705 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.71■□□□□ 0.27
Hcn3O88705 Gm42569-201ENSMUST00000200539 472 ntBASIC16.71■□□□□ 0.27
Hcn3O88705 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn3O88705 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Hcn3O88705 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn3O88705 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn3O88705 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn3O88705 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Hcn3O88705 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn3O88705 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcn3O88705 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn3O88705 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn3O88705 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn3O88705 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn3O88705 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn3O88705 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn3O88705 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Hcn3O88705 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn3O88705 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn3O88705 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hcn3O88705 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn3O88705 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hcn3O88705 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.69■□□□□ 0.26
Hcn3O88705 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Hcn3O88705 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hcn3O88705 Gm10849-201ENSMUST00000100397 618 ntBASIC16.69■□□□□ 0.26
Hcn3O88705 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Hcn3O88705 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms