Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Rnf13O54965 Gm18671-201ENSMUST00000214826 683 ntBASIC15.87■□□□□ 0.13
Rnf13O54965 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf13O54965 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf13O54965 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rnf13O54965 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf13O54965 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.86■□□□□ 0.13
Rnf13O54965 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rnf13O54965 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rnf13O54965 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rnf13O54965 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Rnf13O54965 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Rnf13O54965 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rnf13O54965 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf13O54965 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf13O54965 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf13O54965 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf13O54965 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.85■□□□□ 0.13
Rnf13O54965 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf13O54965 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf13O54965 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.85■□□□□ 0.13
Rnf13O54965 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rnf13O54965 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf13O54965 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf13O54965 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rnf13O54965 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf13O54965 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.85■□□□□ 0.13
Rnf13O54965 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf13O54965 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Rnf13O54965 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf13O54965 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rnf13O54965 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.84■□□□□ 0.13
Rnf13O54965 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rnf13O54965 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf13O54965 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rnf13O54965 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.84■□□□□ 0.13
Rnf13O54965 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.84■□□□□ 0.13
Rnf13O54965 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf13O54965 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf13O54965 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Rnf13O54965 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf13O54965 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Rnf13O54965 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
Rnf13O54965 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf13O54965 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
Rnf13O54965 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Rnf13O54965 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf13O54965 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf13O54965 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Rnf13O54965 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf13O54965 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf13O54965 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.83■□□□□ 0.12
Rnf13O54965 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.83■□□□□ 0.12
Rnf13O54965 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf13O54965 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf13O54965 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rnf13O54965 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf13O54965 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf13O54965 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms