Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Limk2O54785 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Limk2O54785 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Limk2O54785 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Limk2O54785 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Limk2O54785 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Limk2O54785 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.75■□□□□ 0.43
Limk2O54785 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.75■□□□□ 0.43
Limk2O54785 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Limk2O54785 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Limk2O54785 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Limk2O54785 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Limk2O54785 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Limk2O54785 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Limk2O54785 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Limk2O54785 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.74■□□□□ 0.43
Limk2O54785 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Limk2O54785 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Limk2O54785 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Limk2O54785 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Limk2O54785 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.74■□□□□ 0.43
Limk2O54785 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Limk2O54785 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Limk2O54785 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Limk2O54785 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Limk2O54785 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Limk2O54785 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Limk2O54785 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Limk2O54785 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Limk2O54785 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.74■□□□□ 0.43
Limk2O54785 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Limk2O54785 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.73■□□□□ 0.43
Limk2O54785 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Limk2O54785 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.73■□□□□ 0.43
Limk2O54785 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Limk2O54785 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Limk2O54785 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.72■□□□□ 0.43
Limk2O54785 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Limk2O54785 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Limk2O54785 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Limk2O54785 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.72■□□□□ 0.43
Limk2O54785 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Limk2O54785 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.72■□□□□ 0.43
Limk2O54785 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.72■□□□□ 0.43
Limk2O54785 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.72■□□□□ 0.43
Limk2O54785 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Limk2O54785 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Limk2O54785 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Limk2O54785 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Limk2O54785 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.71■□□□□ 0.43
Limk2O54785 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Limk2O54785 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.71■□□□□ 0.43
Limk2O54785 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Limk2O54785 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Limk2O54785 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Limk2O54785 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Limk2O54785 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.7■□□□□ 0.42
Limk2O54785 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.7■□□□□ 0.42
Limk2O54785 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 Gm21814-202ENSMUST00000203277 873 ntBASIC17.7■□□□□ 0.42
Limk2O54785 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.7■□□□□ 0.42
Limk2O54785 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.7■□□□□ 0.42
Limk2O54785 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Limk2O54785 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.7■□□□□ 0.42
Limk2O54785 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms