Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.45■□□□□ 0.22
Abca4O35600 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abca4O35600 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abca4O35600 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.45■□□□□ 0.22
Abca4O35600 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abca4O35600 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abca4O35600 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.45■□□□□ 0.22
Abca4O35600 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.45■□□□□ 0.22
Abca4O35600 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Abca4O35600 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abca4O35600 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.45■□□□□ 0.22
Abca4O35600 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.45■□□□□ 0.22
Abca4O35600 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Abca4O35600 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Abca4O35600 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Gm25911-201ENSMUST00000157621 56 ntBASIC16.44■□□□□ 0.22
Abca4O35600 Gm26308-201ENSMUST00000157768 69 ntBASIC16.44■□□□□ 0.22
Abca4O35600 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.44■□□□□ 0.22
Abca4O35600 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Abca4O35600 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.44■□□□□ 0.22
Abca4O35600 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.44■□□□□ 0.22
Abca4O35600 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.44■□□□□ 0.22
Abca4O35600 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Abca4O35600 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.44■□□□□ 0.22
Abca4O35600 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Abca4O35600 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca4O35600 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca4O35600 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Abca4O35600 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca4O35600 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abca4O35600 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Abca4O35600 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.43■□□□□ 0.22
Abca4O35600 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Abca4O35600 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
Abca4O35600 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca4O35600 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Abca4O35600 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca4O35600 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca4O35600 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Abca4O35600 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca4O35600 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.42■□□□□ 0.22
Abca4O35600 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.42■□□□□ 0.22
Abca4O35600 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca4O35600 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.42■□□□□ 0.22
Abca4O35600 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca4O35600 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca4O35600 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca4O35600 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca4O35600 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca4O35600 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.42■□□□□ 0.22
Abca4O35600 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Abca4O35600 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Abca4O35600 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca4O35600 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.41■□□□□ 0.22
Abca4O35600 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.41■□□□□ 0.22
Abca4O35600 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Abca4O35600 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Abca4O35600 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Abca4O35600 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca4O35600 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca4O35600 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Abca4O35600 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca4O35600 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca4O35600 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Abca4O35600 Gm44872-201ENSMUST00000207864 420 ntBASIC16.41■□□□□ 0.22
Abca4O35600 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.41■□□□□ 0.22
Abca4O35600 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca4O35600 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Abca4O35600 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abca4O35600 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.41■□□□□ 0.22
Abca4O35600 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Abca4O35600 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Abca4O35600 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Abca4O35600 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.4■□□□□ 0.22
Abca4O35600 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Abca4O35600 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.4■□□□□ 0.22
Abca4O35600 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Abca4O35600 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Abca4O35600 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms