Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.4■□□□□ 0.22
Cx3cl1O35188 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.4■□□□□ 0.22
Cx3cl1O35188 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Mir1199-201ENSMUST00000117015 119 ntBASIC16.4■□□□□ 0.22
Cx3cl1O35188 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.4■□□□□ 0.22
Cx3cl1O35188 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.4■□□□□ 0.22
Cx3cl1O35188 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cx3cl1O35188 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Gm6576-201ENSMUST00000169678 883 ntBASIC16.39■□□□□ 0.21
Cx3cl1O35188 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cl1O35188 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cl1O35188 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.37■□□□□ 0.21
Cx3cl1O35188 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Idnk-204ENSMUST00000226010 1898 ntBASIC16.37■□□□□ 0.21
Cx3cl1O35188 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cl1O35188 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cx3cl1O35188 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms