Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sgo2bJ3QMK1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sgo2bJ3QMK1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Sgo2bJ3QMK1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sgo2bJ3QMK1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sgo2bJ3QMK1 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.44■□□□□ 0.38
Sgo2bJ3QMK1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.44■□□□□ 0.38
Sgo2bJ3QMK1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Gm11643-201ENSMUST00000119578 864 ntBASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sgo2bJ3QMK1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sgo2bJ3QMK1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Gm13158-201ENSMUST00000122007 736 ntBASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sgo2bJ3QMK1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sgo2bJ3QMK1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Sgo2bJ3QMK1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sgo2bJ3QMK1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.39■□□□□ 0.38
Sgo2bJ3QMK1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sgo2bJ3QMK1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sgo2bJ3QMK1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Gm12527-201ENSMUST00000117967 564 ntBASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms