Protein–RNA interactions for Protein: G3X952

Zkscan2, MCG20985, isoform CRA_a, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zkscan2G3X952 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Zkscan2G3X952 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zkscan2G3X952 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Zkscan2G3X952 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zkscan2G3X952 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zkscan2G3X952 Gm5643-201ENSMUST00000117081 966 ntBASIC21.25■□□□□ 0.99
Zkscan2G3X952 Gm37292-201ENSMUST00000192062 758 ntBASIC21.25■□□□□ 0.99
Zkscan2G3X952 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zkscan2G3X952 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zkscan2G3X952 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Zkscan2G3X952 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Zkscan2G3X952 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zkscan2G3X952 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zkscan2G3X952 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zkscan2G3X952 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.24■□□□□ 0.99
Zkscan2G3X952 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Zkscan2G3X952 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zkscan2G3X952 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zkscan2G3X952 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Zkscan2G3X952 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zkscan2G3X952 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Zkscan2G3X952 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zkscan2G3X952 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zkscan2G3X952 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zkscan2G3X952 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zkscan2G3X952 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Zkscan2G3X952 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zkscan2G3X952 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zkscan2G3X952 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zkscan2G3X952 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zkscan2G3X952 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zkscan2G3X952 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zkscan2G3X952 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zkscan2G3X952 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Gm12382-201ENSMUST00000122005 922 ntBASIC21.21■□□□□ 0.99
Zkscan2G3X952 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.21■□□□□ 0.99
Zkscan2G3X952 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Zkscan2G3X952 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.2■□□□□ 0.99
Zkscan2G3X952 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Zkscan2G3X952 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Zkscan2G3X952 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Gm10653-202ENSMUST00000139570 835 ntBASIC21.2■□□□□ 0.98
Zkscan2G3X952 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zkscan2G3X952 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zkscan2G3X952 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zkscan2G3X952 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zkscan2G3X952 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zkscan2G3X952 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Zkscan2G3X952 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Zkscan2G3X952 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.19■□□□□ 0.98
Zkscan2G3X952 Gm43183-201ENSMUST00000200632 547 ntBASIC21.19■□□□□ 0.98
Zkscan2G3X952 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zkscan2G3X952 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zkscan2G3X952 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zkscan2G3X952 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zkscan2G3X952 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zkscan2G3X952 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zkscan2G3X952 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zkscan2G3X952 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zkscan2G3X952 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zkscan2G3X952 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Zkscan2G3X952 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Zkscan2G3X952 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zkscan2G3X952 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms