Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NpcdF8VQB8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NpcdF8VQB8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NpcdF8VQB8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NpcdF8VQB8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.96■□□□□ 0.95
NpcdF8VQB8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NpcdF8VQB8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
NpcdF8VQB8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
NpcdF8VQB8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.96■□□□□ 0.95
NpcdF8VQB8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NpcdF8VQB8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
NpcdF8VQB8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.95■□□□□ 0.94
NpcdF8VQB8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.95■□□□□ 0.94
NpcdF8VQB8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NpcdF8VQB8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.94■□□□□ 0.94
NpcdF8VQB8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Gm9731-201ENSMUST00000209480 747 ntBASIC20.94■□□□□ 0.94
NpcdF8VQB8 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.94■□□□□ 0.94
NpcdF8VQB8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.94■□□□□ 0.94
NpcdF8VQB8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NpcdF8VQB8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NpcdF8VQB8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Mir770-201ENSMUST00000103252 94 ntBASIC20.92■□□□□ 0.94
NpcdF8VQB8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Olfr129-201ENSMUST00000122318 993 ntBASIC20.92■□□□□ 0.94
NpcdF8VQB8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NpcdF8VQB8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NpcdF8VQB8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NpcdF8VQB8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NpcdF8VQB8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NpcdF8VQB8 Gm18195-201ENSMUST00000207604 706 ntBASIC20.91■□□□□ 0.94
NpcdF8VQB8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.91■□□□□ 0.94
NpcdF8VQB8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.91■□□□□ 0.94
NpcdF8VQB8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NpcdF8VQB8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms