Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Gm13401-201ENSMUST00000117074 291 ntBASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh9F8VPK8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh9F8VPK8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Pcdh9F8VPK8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh9F8VPK8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh9F8VPK8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdh9F8VPK8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
Pcdh9F8VPK8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms