Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh1F7BJK1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh1F7BJK1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Gm38285-201ENSMUST00000192928 922 ntBASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.74■□□□□ 0.11
Pcdh1F7BJK1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Gm29791-202ENSMUST00000207888 369 ntBASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Gm7514-201ENSMUST00000209475 934 ntBASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh1F7BJK1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Gm10033-202ENSMUST00000211874 928 ntBASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh1F7BJK1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdh1F7BJK1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms