Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.56■□□□□ 0.4
Col6a3E9PWQ3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Gm8396-201ENSMUST00000057361 823 ntBASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Gm15653-201ENSMUST00000119247 907 ntBASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a3E9PWQ3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Gm15173-201ENSMUST00000122049 433 ntBASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a3E9PWQ3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Gm13401-201ENSMUST00000117074 291 ntBASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Gm15590-201ENSMUST00000078419 552 ntBASIC17.53■□□□□ 0.4
Col6a3E9PWQ3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Gm9731-201ENSMUST00000209480 747 ntBASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a3E9PWQ3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms