Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clca3bE9PUL3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Gm6433-201ENSMUST00000118634 875 ntBASIC18.81■□□□□ 0.6
Clca3bE9PUL3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clca3bE9PUL3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Gm7791-201ENSMUST00000219066 539 ntBASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clca3bE9PUL3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clca3bE9PUL3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Gm27463-201ENSMUST00000183569 57 ntBASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Gm37025-201ENSMUST00000195159 829 ntBASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Gm9987-201ENSMUST00000069768 567 ntBASIC18.79■□□□□ 0.6
Clca3bE9PUL3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.79■□□□□ 0.6
Clca3bE9PUL3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Gm7889-201ENSMUST00000185591 958 ntBASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clca3bE9PUL3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Gm17661-201ENSMUST00000170317 270 ntBASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Gm9731-201ENSMUST00000209480 747 ntBASIC18.77■□□□□ 0.6
Clca3bE9PUL3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clca3bE9PUL3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clca3bE9PUL3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clca3bE9PUL3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clca3bE9PUL3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clca3bE9PUL3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms