Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.6■□□□□ 0.09
Shank1D3YZU1 AW822252-206ENSMUST00000208904 237 ntBASIC15.6■□□□□ 0.09
Shank1D3YZU1 Gm7213-201ENSMUST00000215977 950 ntBASIC15.6■□□□□ 0.09
Shank1D3YZU1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shank1D3YZU1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shank1D3YZU1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.59■□□□□ 0.09
Shank1D3YZU1 Mir3081-201ENSMUST00000175305 84 ntBASIC15.59■□□□□ 0.09
Shank1D3YZU1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shank1D3YZU1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Shank1D3YZU1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Shank1D3YZU1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Shank1D3YZU1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shank1D3YZU1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Gm24841-201ENSMUST00000158676 357 ntBASIC15.58■□□□□ 0.08
Shank1D3YZU1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Shank1D3YZU1 Gm9731-201ENSMUST00000209480 747 ntBASIC15.58■□□□□ 0.08
Shank1D3YZU1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.58■□□□□ 0.08
Shank1D3YZU1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.57■□□□□ 0.08
Shank1D3YZU1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Olfr129-201ENSMUST00000122318 993 ntBASIC15.57■□□□□ 0.08
Shank1D3YZU1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Gm37025-201ENSMUST00000195159 829 ntBASIC15.57■□□□□ 0.08
Shank1D3YZU1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.57■□□□□ 0.08
Shank1D3YZU1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shank1D3YZU1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Shank1D3YZU1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms